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Coretex
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Public Member Functions | |
bool | isValidSequenceFile (cls, Union[Path, str] path) |
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Path | path (self) |
Path | zipPath (self) |
Path | downloadPath (self) |
bool | modifiedSinceLastDownload (self) |
None | decrypt (self, bool ignoreCache=False) |
None | download (self, bool decrypt=True, bool ignoreCache=False) |
None | unzip (self, bool ignoreCache=False) |
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Path | joinPath (self, Union[Path, str] other) |
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Path | sequencePath (self) |
Path | forwardPath (self) |
Path | reversePath (self) |
None | unzip (self, bool ignoreCache=False) |
bool | isPairedEnd (self) |
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Path | path (self) |
Path | zipPath (self) |
None | download (self, bool decrypt=True, bool ignoreCache=False) |
Represents the local custom Sample class which is used for working with Other Task locally
Definition at line 25 of file sequence_sample.py.
bool coretex.entities.sample.sequence_sample.sequence_sample.SequenceSample.isValidSequenceFile | ( | cls, | |
Union[Path, str] | path | ||
) |
Checks whether the file is a valid sequence file or not. File is a valid sequence file if it ends with any of these extensions: - .fasta - .fastq - .fa - .fq
Definition at line 36 of file sequence_sample.py.